eu.etrap.medusa.significance

Class FrequencySignificanceImpl

java.lang.Object

eu.etrap.medusa.config.ClassConfig

eu.etrap.medusa.significance.AbstractSignificance

eu.etrap.medusa.significance.FrequencySignificanceImpl

All Implemented Interfaces:

Significance

public class FrequencySignificanceImpl
extends AbstractSignificance

Author:

development

Field Summary

Fields inherited from class eu.etrap.medusa.significance.AbstractSignificance

n, PARSER_FILTER_IMPL, scalefactor

Fields inherited from class eu.etrap.medusa.config.ClassConfig

BOOLEAN_DEFAULT, DOUBLE_DEFAULT, FORMAT_IMPL, INT_DEFAULT, LONG_DEFAULT, objConf, objConfCategory, objFormat, strBackupConfFile, STRING_DEFAULT

Constructor Summary

Constructors

Constructor and Description
FrequencySignificanceImpl() Creates a new instance of FrequencySignificanceImpl

Method Summary

Modifier and Type	Method and Description
long	compute(int nab, int na, int nb)
double	computeASDouble(int nab, int na, int nb)
java.lang.String	getAbbreviation()

Methods inherited from class eu.etrap.medusa.significance.AbstractSignificance

computeASDouble, init

Methods inherited from class eu.etrap.medusa.config.ClassConfig

config, getConfiguration, getGlobalProperty, getProperty, getProperty, getStatisticsProperty, loadFormatImpl, selfconfig, setGlobalProperty, setProperty, setProperty, setStatisticsProperty, setStatisticsProperty

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

FrequencySignificanceImpl

public FrequencySignificanceImpl()

Creates a new instance of FrequencySignificanceImpl

Method Detail

compute

public long compute(int nab,
                    int na,
                    int nb)

Specified by:

compute in interface Significance

Overrides:

compute in class AbstractSignificance

computeASDouble

public double computeASDouble(int nab,
                              int na,
                              int nb)

Specified by:

computeASDouble in interface Significance

Overrides:

computeASDouble in class AbstractSignificance

getAbbreviation

public java.lang.String getAbbreviation()

Specified by:

getAbbreviation in interface Significance

Overrides:

getAbbreviation in class AbstractSignificance